/usr/local/fsl/bin/probtrackx2 -x /Users/rehappydoc/Documents/Tracula/Yang_DuSung/mri/roi/10.nii.gz -l --onewaycondition --omatrix1 -c 0.2 -S 2000 --steplength=0.5 -P 100 --fibthresh=0.01 --distthresh=0.0 --sampvox=0.0 --xfm=/Users/rehappydoc/Documents/Tracula/Yang_DuSung/dmri/xfms/mni2diff.bbr.mat --avoid=/Users/rehappydoc/Documents/Tracula/Yang_DuSung/mri/roi/exclusionmask2.nii.gz --forcedir --opd -s /Users/rehappydoc/Documents/Tracula/Yang_DuSung/dmri.bedpostX/merged -m /Users/rehappydoc/Documents/Tracula/Yang_DuSung/dmri.bedpostX/nodif_brain_mask --dir=/Users/rehappydoc/Documents/Tracula/Yang_DuSung/thalamus_5 --targetmasks=/Users/rehappydoc/Documents/Tracula/Yang_DuSung/thalamus_5/targets.txt --os2t
http://dbic.dartmouth.edu/wiki/index.php/Diffusion_Tensor_Imaging_Analysis
'Brain imaging & Unix command > command' 카테고리의 다른 글
| Registration flirt & fnirt의 순 (0) | 2017.01.05 |
|---|---|
| GLM model (0) | 2017.01.04 |
| MRIcron으로 한 brain ROI 및 thalamus 그림 (0) | 2016.11.19 |
| Freesurfer_LUT_Hompage (ROI) number (0) | 2016.11.19 |
| probablistic test ROI 만들기 (0) | 2016.11.19 |