그물에 걸리지 않는 바람

Smoothing: Voxel 간의 Correlation, 가까운 Voxel 일 수록 Correlatin 이 높다. Smoothing : s smothest -z FWHMx(full width half maximum) Cluster 명령을 치면 Voxel size를 알 수 있다.

UNC neonatal atlas https://www.med.unc.edu/bric/ideagroup/tools/projects-1/brain/pages-1/projects registation user guide http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FNIRT/UserGuide registration practical http://fsl.fmrib.ox.ac.uk/fslcourse/lectures/practicals/registration/index.html#applying tractography practical http://fsl.fmrib.ox.ac.uk/fslcourse/lectures/practicals/fdt2/ http://..

#!/bin/sh# this is MERGED script for (i)transformation, (ii) roi making, and (iii) exclusion masking.# THIS IS VERSION 2: FOR APARC+ASEGS2009S.# THIS SCRIPT IS TO BE FOLLOWED BY TRAC_02_MAKEROILISTcmd=$hr/batchcode/commands_roimergeecho command file is $cmdexport FSLDIR=$WORK/fsl/fsl for s in `cat $hr/fs/goodsubject.txt` docat <<EOM > $cmd#!/bin/bash#$ -l mem=3G,time=6..

처음으로 TBSS로 차이가 나는 부분을 확인한 그림.... 통계로 thalamus에 이상이 나타나서, 다시 randomise 명령어를 새로운 mask를 가지고 분석

$code/fsl_sub_hpc_12 randomise -i all_FA_skeletonised.nii -o remit_lme_rand_thalamus -m mean_FA_skeleton_thalamus_dilM.nii -d $d/remit_lme.mat -t $d/remit_lme.con -e $d/remit_lme.grp —T2 fslmaths Thalamus.nii.gz -bin thalamus_bin # Thalmus probablistic ROI를 binary mask image로 바꾸는 명령어 fslmaths thalamus_bin.nii.gz -dilM thalamus_bin_dilM # 그렇게 해서 ..

명령어를 치고 난 뒤 &을 치면 terminal을 다시 이용할 수 있다. https://wiki.kldp.org/HOWTO//html/Adv-Bash-Scr-HOWTO/index.html http://webtn.tistory.com/entry/UNIX-%EB%82%98%EB%8F%84%EA%B0%9C%EB%B0%9C%EC%9E%90%EB%8B%A4-%EC%9E%89-%EC%B0%B8-%EC%89%AC%EC%9A%B4-Shell-%EC%8A%A4%ED%81%AC%EB%A6%BD%ED%8A%B8-%ED%95%9C%EB%B2%88-%ED%95%B4%EB%B3%BC%EA%B9%8C%EC%9A%94

PATH=$PATH:폴더 기존의 PATH 뒤에 추가하고 싶은 폴더를 쓰면 된다. 윈도우에서는 폴더 사이의 구분자가 세미콜론(;)이지만 리눅스에서는 콜론(:)이다. [root@localhost ~]# echo $PATH /usr/local/sbin:/bin:/usr/sbin:/usr/bin [root@localhost ~]# PATH=$PATH:/home:/var [root@localhost ~]# echo $PATH /usr/local/sbin:/bin:/usr/sbin:/usr/bin:/..

Press Command+Space and type Terminal and press enter/return key.Run in Terminal app:ruby -e "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/master/install)" < /dev/null 2> /dev/nulland press enter/return key. Wait for the command to finish.Run:brew install lesstif

#! /bin/bash cd /Users/rehappydoc/Documents/data/ for s in `ls . -d` do echo $s if [ -e /Users/rehappydoc/Documents/data/$s/fdt2_eddycorrect.brainextract.ditfit/\ dti_FA.nii.gz ];then echo $s echo $s>> /Users/rehappydoc/Documents/subjectlist.txt /Users/rehappydoc/Documents/data/Sort_list cp /Users/rehappydoc/Documents/data/$s/fdt2_eddycorrect.brainextract.ditfit/dti_F\ A...